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Cluster: CGMR024805_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_28700 k141_28700_45 47048 47890 - 3.A.1.1.41
TC k141_28700 k141_28700_46 47902 48816 - 3.A.1.1.25
TC k141_28700 k141_28700_47 48876 50252 - 3.A.1.1.41
TF k141_28700 k141_28700_48 50438 51961 - HTH_AraC | HTH_AraC
TC k141_28700 k141_28700_49 51958 53739 - 9.B.33.1.1
pfam k141_28700 k141_28700_50 54047 55762 + ILVD_EDD_N | ILV_EDD_C
TC k141_28700 k141_28700_51 55909 57690 + 8.A.59.2.1
TF k141_28700 k141_28700_52 57702 58445 + HTH_AraC
STP k141_28700 k141_28700_53 58574 59878 + SBP_bac_1
TC k141_28700 k141_28700_54 60032 60934 + 3.A.1.1.17
TC k141_28700 k141_28700_55 60931 61779 + 3.A.1.1.33
CAZyme k141_28700 k141_28700_56 61805 63811 + GH31_4
CAZyme k141_28700 k141_28700_57 63875 65554 + GH13_31
pfam k141_28700 k141_28700_58 65569 66543 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme k141_28700 k141_28700_59 66710 67600 + GT111
pfam k141_28700 k141_28700_60 67624 68391 + ABC2_membrane
TC k141_28700 k141_28700_61 68407 69141 + 3.A.1.103.5
Gene ID: k141_28700_45
Type: TC
Location: 47048 - 47890 (-)
Gene ID: k141_28700_46
Type: TC
Location: 47902 - 48816 (-)
Gene ID: k141_28700_47
Type: TC
Location: 48876 - 50252 (-)
Gene ID: k141_28700_48
Type: TF
Location: 50438 - 51961 (-)
Gene ID: k141_28700_49
Type: TC
Location: 51958 - 53739 (-)
Gene ID: k141_28700_50
Type: pfam
Location: 54047 - 55762 (+)
Gene ID: k141_28700_51
Type: TC
Location: 55909 - 57690 (+)
Gene ID: k141_28700_52
Type: TF
Location: 57702 - 58445 (+)
Gene ID: k141_28700_53
Type: STP
Location: 58574 - 59878 (+)
Gene ID: k141_28700_54
Type: TC
Location: 60032 - 60934 (+)
Gene ID: k141_28700_55
Type: TC
Location: 60931 - 61779 (+)
Gene ID: k141_28700_56
Type: CAZyme
Location: 61805 - 63811 (+)
Gene ID: k141_28700_57
Type: CAZyme
Location: 63875 - 65554 (+)
Gene ID: k141_28700_58
Type: pfam
Location: 65569 - 66543 (+)
Gene ID: k141_28700_59
Type: CAZyme
Location: 66710 - 67600 (+)
Gene ID: k141_28700_60
Type: pfam
Location: 67624 - 68391 (+)
Gene ID: k141_28700_61
Type: TC
Location: 68407 - 69141 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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