Cluster: CGMR024805_CGC36
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR024805
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12808 | k141_12808_39 | 40985 | 42451 | + | 2.A.25.1.4 |
| TC | k141_12808 | k141_12808_40 | 42726 | 44858 | + | 3.A.10.1.13 |
| pfam | k141_12808 | k141_12808_41 | 44956 | 45651 | - | Aldolase_II |
| pfam | k141_12808 | k141_12808_42 | 46025 | 46501 | - | tRNA_edit |
| TC | k141_12808 | k141_12808_43 | 46523 | 47224 | - | 3.A.1.121.4 |
| TC | k141_12808 | k141_12808_44 | 47315 | 48112 | - | 3.A.1.121.4 |
| TC | k141_12808 | k141_12808_45 | 48285 | 49049 | + | 2.A.79.1.4 |
| pfam | k141_12808 | k141_12808_46 | 49046 | 49492 | + | ThrE | ThrE_2 |
| TC | k141_12808 | k141_12808_47 | 49563 | 50273 | + | 3.A.1.26.6 |
| pfam | k141_12808 | k141_12808_48 | 50557 | 52068 | + | SSF |
| CAZyme | k141_12808 | k141_12808_49 | 52091 | 53170 | + | CE15 |
| pfam | k141_12808 | k141_12808_50 | 53382 | 54101 | + | ABC_trans_CmpB |
| TC | k141_12808 | k141_12808_51 | 54164 | 55060 | - | 2.A.4.7.9 |
Gene ID: k141_12808_39
Type: TC
Location: 40985 - 42451 (+)
Type: TC
Location: 40985 - 42451 (+)
Gene ID: k141_12808_40
Type: TC
Location: 42726 - 44858 (+)
Type: TC
Location: 42726 - 44858 (+)
Gene ID: k141_12808_41
Type: pfam
Location: 44956 - 45651 (-)
Type: pfam
Location: 44956 - 45651 (-)
Gene ID: k141_12808_42
Type: pfam
Location: 46025 - 46501 (-)
Type: pfam
Location: 46025 - 46501 (-)
Gene ID: k141_12808_43
Type: TC
Location: 46523 - 47224 (-)
Type: TC
Location: 46523 - 47224 (-)
Gene ID: k141_12808_44
Type: TC
Location: 47315 - 48112 (-)
Type: TC
Location: 47315 - 48112 (-)
Gene ID: k141_12808_45
Type: TC
Location: 48285 - 49049 (+)
Type: TC
Location: 48285 - 49049 (+)
Gene ID: k141_12808_46
Type: pfam
Location: 49046 - 49492 (+)
Type: pfam
Location: 49046 - 49492 (+)
Gene ID: k141_12808_47
Type: TC
Location: 49563 - 50273 (+)
Type: TC
Location: 49563 - 50273 (+)
Gene ID: k141_12808_48
Type: pfam
Location: 50557 - 52068 (+)
Type: pfam
Location: 50557 - 52068 (+)
Gene ID: k141_12808_49
Type: CAZyme
Location: 52091 - 53170 (+)
Type: CAZyme
Location: 52091 - 53170 (+)
Gene ID: k141_12808_50
Type: pfam
Location: 53382 - 54101 (+)
Type: pfam
Location: 53382 - 54101 (+)
Gene ID: k141_12808_51
Type: TC
Location: 54164 - 55060 (-)
Type: TC
Location: 54164 - 55060 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.