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Cluster: CGMR024118_CGC82

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_29533 k141_29533_249 300748 303093 + GH20
CAZyme k141_29533 k141_29533_250 303239 305689 - GH51_2
STP k141_29533 k141_29533_251 305891 307009 + HATPase_c | HisKA | Response_reg
CAZyme k141_29533 k141_29533_252 307092 307850 - GT2
pfam k141_29533 k141_29533_253 307938 311318 + DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
TC k141_29533 k141_29533_254 311326 313230 + 4.C.1.1.14
TF k141_29533 k141_29533_255 313569 314159 + GerE
STP k141_29533 k141_29533_256 314199 315227 + FecR
TC k141_29533 k141_29533_257 315494 318940 + 1.B.14.6.1
Gene ID: k141_29533_249
Type: CAZyme
Location: 300748 - 303093 (+)
Gene ID: k141_29533_250
Type: CAZyme
Location: 303239 - 305689 (-)
Gene ID: k141_29533_251
Type: STP
Location: 305891 - 307009 (+)
Gene ID: k141_29533_252
Type: CAZyme
Location: 307092 - 307850 (-)
Gene ID: k141_29533_253
Type: pfam
Location: 307938 - 311318 (+)
Gene ID: k141_29533_254
Type: TC
Location: 311326 - 313230 (+)
Gene ID: k141_29533_255
Type: TF
Location: 313569 - 314159 (+)
Gene ID: k141_29533_256
Type: STP
Location: 314199 - 315227 (+)
Gene ID: k141_29533_257
Type: TC
Location: 315494 - 318940 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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