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Cluster: CGMR024118_CGC78

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_29533 k141_29533_56 72193 73191 + GH43_34
STP k141_29533 k141_29533_57 73314 73958 + TetR_N
pfam k141_29533 k141_29533_58 73976 75295 + OEP | OEP
TC k141_29533 k141_29533_59 75560 76453 + 3.A.1.105.16
TC k141_29533 k141_29533_60 76459 77379 + 3.A.1.105.15
TC k141_29533 k141_29533_61 77763 78500 + 3.A.1.105.15
TC k141_29533 k141_29533_62 78545 79051 + 3.A.1.105.4
TC k141_29533 k141_29533_63 79057 79677 + 3.A.1.105.4
TC k141_29533 k141_29533_64 79677 80774 + 3.A.1.105.15
Gene ID: k141_29533_56
Type: CAZyme
Location: 72193 - 73191 (+)
Gene ID: k141_29533_57
Type: STP
Location: 73314 - 73958 (+)
Gene ID: k141_29533_58
Type: pfam
Location: 73976 - 75295 (+)
Gene ID: k141_29533_59
Type: TC
Location: 75560 - 76453 (+)
Gene ID: k141_29533_60
Type: TC
Location: 76459 - 77379 (+)
Gene ID: k141_29533_61
Type: TC
Location: 77763 - 78500 (+)
Gene ID: k141_29533_62
Type: TC
Location: 78545 - 79051 (+)
Gene ID: k141_29533_63
Type: TC
Location: 79057 - 79677 (+)
Gene ID: k141_29533_64
Type: TC
Location: 79677 - 80774 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_29533_59 vegetarian > vegan 1.74328 0.01277

🧭 Explore Read Mapping of CGC

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