Cluster: CGMR024118_CGC74
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR024118
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_14737 | k141_14737_59 | 85048 | 87000 | + | GH51_2 |
| CAZyme | k141_14737 | k141_14737_60 | 87018 | 88940 | + | GH97 |
| NULL(UNKNOWN) | k141_14737 | k141_14737_61 | 89066 | 91630 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_14737 | k141_14737_62 | 91670 | 95785 | + | HTH_AraC |
| CAZyme | k141_14737 | k141_14737_63 | 95796 | 96953 | + | PL38 |
| TC | k141_14737 | k141_14737_64 | 97152 | 100232 | + | 1.B.14.6.1 |
| TC | k141_14737 | k141_14737_65 | 100257 | 101738 | + | 8.A.46.1.3 |
| CAZyme | k141_14737 | k141_14737_66 | 101741 | 104221 | + | GH2 |
| TF | k141_14737 | k141_14737_67 | 104345 | 105226 | - | HTH_1 |
| TC | k141_14737 | k141_14737_68 | 105328 | 106617 | + | 2.A.1.36.1 |
| TC | k141_14737 | k141_14737_69 | 106802 | 108208 | + | 3.A.1.11.8 |
| TC | k141_14737 | k141_14737_70 | 108198 | 108998 | + | 3.A.1.11.8 |
| TC | k141_14737 | k141_14737_71 | 108995 | 109783 | + | 3.A.1.11.8 |
| TC | k141_14737 | k141_14737_72 | 109833 | 111128 | + | 3.A.1.11.7 |
| pfam | k141_14737 | k141_14737_73 | 111159 | 111776 | + | Hydrolase | HAD_2 |
| pfam | k141_14737 | k141_14737_74 | 111848 | 112816 | + | Mfa2 |
| TC | k141_14737 | k141_14737_75 | 112813 | 113499 | - | 2.A.88.8.3 |
Gene ID: k141_14737_59
Type: CAZyme
Location: 85048 - 87000 (+)
Type: CAZyme
Location: 85048 - 87000 (+)
Gene ID: k141_14737_60
Type: CAZyme
Location: 87018 - 88940 (+)
Type: CAZyme
Location: 87018 - 88940 (+)
Gene ID: k141_14737_61
Type:
Location: 89066 - 91630 (+)
Type:
Location: 89066 - 91630 (+)
Gene ID: k141_14737_62
Type: TF
Location: 91670 - 95785 (+)
Type: TF
Location: 91670 - 95785 (+)
Gene ID: k141_14737_63
Type: CAZyme
Location: 95796 - 96953 (+)
Type: CAZyme
Location: 95796 - 96953 (+)
Gene ID: k141_14737_64
Type: TC
Location: 97152 - 100232 (+)
Type: TC
Location: 97152 - 100232 (+)
Gene ID: k141_14737_65
Type: TC
Location: 100257 - 101738 (+)
Type: TC
Location: 100257 - 101738 (+)
Gene ID: k141_14737_66
Type: CAZyme
Location: 101741 - 104221 (+)
Type: CAZyme
Location: 101741 - 104221 (+)
Gene ID: k141_14737_67
Type: TF
Location: 104345 - 105226 (-)
Type: TF
Location: 104345 - 105226 (-)
Gene ID: k141_14737_68
Type: TC
Location: 105328 - 106617 (+)
Type: TC
Location: 105328 - 106617 (+)
Gene ID: k141_14737_69
Type: TC
Location: 106802 - 108208 (+)
Type: TC
Location: 106802 - 108208 (+)
Gene ID: k141_14737_70
Type: TC
Location: 108198 - 108998 (+)
Type: TC
Location: 108198 - 108998 (+)
Gene ID: k141_14737_71
Type: TC
Location: 108995 - 109783 (+)
Type: TC
Location: 108995 - 109783 (+)
Gene ID: k141_14737_72
Type: TC
Location: 109833 - 111128 (+)
Type: TC
Location: 109833 - 111128 (+)
Gene ID: k141_14737_73
Type: pfam
Location: 111159 - 111776 (+)
Type: pfam
Location: 111159 - 111776 (+)
Gene ID: k141_14737_74
Type: pfam
Location: 111848 - 112816 (+)
Type: pfam
Location: 111848 - 112816 (+)
Gene ID: k141_14737_75
Type: TC
Location: 112813 - 113499 (-)
Type: TC
Location: 112813 - 113499 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.