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Cluster: CGMR024118_CGC65

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1953 k141_1953_35 44473 45276 - 3.A.1.15.3
NULL(UNKNOWN) k141_1953 k141_1953_36 45442 45864 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_1953 k141_1953_37 45940 47163 - EPSP_synthase
CAZyme k141_1953 k141_1953_38 47263 48381 - GH105
NULL(UNKNOWN) k141_1953 k141_1953_39 48392 50128 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_1953 k141_1953_40 50247 51848 - 8.A.46.1.6
TC k141_1953 k141_1953_41 51869 55108 - 1.B.14.6.1
STP k141_1953 k141_1953_42 55302 56285 - FecR
TF k141_1953 k141_1953_43 56349 56882 - GerE
CAZyme k141_1953 k141_1953_44 57049 58434 - GH177
TC k141_1953 k141_1953_45 58446 60167 - 8.A.46.1.6
TC k141_1953 k141_1953_46 60181 63417 - 1.B.14.6.1
Gene ID: k141_1953_35
Type: TC
Location: 44473 - 45276 (-)
Gene ID: k141_1953_36
Type:
Location: 45442 - 45864 (-)
Gene ID: k141_1953_37
Type: STP
Location: 45940 - 47163 (-)
Gene ID: k141_1953_38
Type: CAZyme
Location: 47263 - 48381 (-)
Gene ID: k141_1953_39
Type:
Location: 48392 - 50128 (-)
Gene ID: k141_1953_40
Type: TC
Location: 50247 - 51848 (-)
Gene ID: k141_1953_41
Type: TC
Location: 51869 - 55108 (-)
Gene ID: k141_1953_42
Type: STP
Location: 55302 - 56285 (-)
Gene ID: k141_1953_43
Type: TF
Location: 56349 - 56882 (-)
Gene ID: k141_1953_44
Type: CAZyme
Location: 57049 - 58434 (-)
Gene ID: k141_1953_45
Type: TC
Location: 58446 - 60167 (-)
Gene ID: k141_1953_46
Type: TC
Location: 60181 - 63417 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1953_38 vegetarian > omnivore 1.03343 0.00050

🧭 Explore Read Mapping of CGC

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