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Cluster: CGMR024118_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_50672 k141_50672_2 834 1787 + GT2
TC k141_50672 k141_50672_3 1803 2369 + 2.A.107.1.2
pfam k141_50672 k141_50672_4 2429 4159 + ILVD_EDD_N | ILV_EDD_C
TC k141_50672 k141_50672_5 4152 5522 + 2.A.8.1.8
NULL(UNKNOWN) k141_50672 k141_50672_6 5801 7021 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_50672 k141_50672_7 7002 8210 + GT4
CAZyme k141_50672 k141_50672_8 8218 9297 + GT4
CAZyme k141_50672 k141_50672_9 9388 10491 - GH33
CAZyme k141_50672 k141_50672_10 10558 11556 - GT2
Gene ID: k141_50672_2
Type: CAZyme
Location: 834 - 1787 (+)
Gene ID: k141_50672_3
Type: TC
Location: 1803 - 2369 (+)
Gene ID: k141_50672_4
Type: pfam
Location: 2429 - 4159 (+)
Gene ID: k141_50672_5
Type: TC
Location: 4152 - 5522 (+)
Gene ID: k141_50672_6
Type:
Location: 5801 - 7021 (+)
Gene ID: k141_50672_7
Type: CAZyme
Location: 7002 - 8210 (+)
Gene ID: k141_50672_8
Type: CAZyme
Location: 8218 - 9297 (+)
Gene ID: k141_50672_9
Type: CAZyme
Location: 9388 - 10491 (-)
Gene ID: k141_50672_10
Type: CAZyme
Location: 10558 - 11556 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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