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Cluster: CGMR024118_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9615 k141_9615_1 479 1669 + 3.A.1.7.5
TC k141_9615 k141_9615_2 1678 2565 + 3.A.1.7.2
TC k141_9615 k141_9615_3 2576 3328 + 3.A.1.7.1
pfam k141_9615 k141_9615_4 3360 4037 + PhoU | PhoU
pfam k141_9615 k141_9615_5 4077 5279 + Porin_O_P
CAZyme k141_9615 k141_9615_6 5280 7709 - GH95
TC k141_9615 k141_9615_7 8362 10209 - 3.A.1.135.5
NULL(UNKNOWN) k141_9615 k141_9615_8 10548 11018 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_9615 k141_9615_9 11015 12088 + Radical_SAM | SPASM
CAZyme k141_9615 k141_9615_10 12198 13961 + GH123
Gene ID: k141_9615_1
Type: TC
Location: 479 - 1669 (+)
Gene ID: k141_9615_2
Type: TC
Location: 1678 - 2565 (+)
Gene ID: k141_9615_3
Type: TC
Location: 2576 - 3328 (+)
Gene ID: k141_9615_4
Type: pfam
Location: 3360 - 4037 (+)
Gene ID: k141_9615_5
Type: pfam
Location: 4077 - 5279 (+)
Gene ID: k141_9615_6
Type: CAZyme
Location: 5280 - 7709 (-)
Gene ID: k141_9615_7
Type: TC
Location: 8362 - 10209 (-)
Gene ID: k141_9615_8
Type:
Location: 10548 - 11018 (+)
Gene ID: k141_9615_9
Type: pfam
Location: 11015 - 12088 (+)
Gene ID: k141_9615_10
Type: CAZyme
Location: 12198 - 13961 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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