Cluster: CGMR024118_CGC23
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR024118
- CGC Family ID: CGCFAM_08400
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_3328 | k141_3328_34 | 42526 | 44217 | - | 9.A.25.1.1 |
| pfam | k141_3328 | k141_3328_35 | 44229 | 46175 | - | Thioredoxin | Redoxin | Thioredoxin_8 |
| pfam | k141_3328 | k141_3328_36 | 46186 | 47331 | - | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369 |
| TC | k141_3328 | k141_3328_37 | 47471 | 48145 | - | 3.A.1.122.14 |
| STP | k141_3328 | k141_3328_38 | 48571 | 49380 | + | NUDIX |
| peptidase | k141_3328 | k141_3328_39 | 49422 | 51566 | + | S09.UPB |
| CAZyme | k141_3328 | k141_3328_40 | 51638 | 53272 | - | GH33 |
| sulfatase | k141_3328 | k141_3328_41 | 53279 | 54715 | - | S1_7 |
| CAZyme | k141_3328 | k141_3328_42 | 54770 | 55897 | - | GH33 |
| pfam | k141_3328 | k141_3328_43 | 55919 | 56857 | - | DHDPS |
| pfam | k141_3328 | k141_3328_44 | 56867 | 58321 | - | SusD_RagB | SusD-like_3 |
| TC | k141_3328 | k141_3328_45 | 58358 | 61522 | - | 1.B.14.6.1 |
| pfam | k141_3328 | k141_3328_46 | 61607 | 62518 | - | DHDPS |
| TC | k141_3328 | k141_3328_47 | 62523 | 65114 | - | 2.A.21.3.7 |
Gene ID: k141_3328_34
Type: TC
Location: 42526 - 44217 (-)
Type: TC
Location: 42526 - 44217 (-)
Gene ID: k141_3328_35
Type: pfam
Location: 44229 - 46175 (-)
Type: pfam
Location: 44229 - 46175 (-)
Gene ID: k141_3328_36
Type: pfam
Location: 46186 - 47331 (-)
Type: pfam
Location: 46186 - 47331 (-)
Gene ID: k141_3328_37
Type: TC
Location: 47471 - 48145 (-)
Type: TC
Location: 47471 - 48145 (-)
Gene ID: k141_3328_38
Type: STP
Location: 48571 - 49380 (+)
Type: STP
Location: 48571 - 49380 (+)
Gene ID: k141_3328_39
Type: peptidase
Location: 49422 - 51566 (+)
Type: peptidase
Location: 49422 - 51566 (+)
Gene ID: k141_3328_40
Type: CAZyme
Location: 51638 - 53272 (-)
Type: CAZyme
Location: 51638 - 53272 (-)
Gene ID: k141_3328_41
Type: sulfatase
Location: 53279 - 54715 (-)
Type: sulfatase
Location: 53279 - 54715 (-)
Gene ID: k141_3328_42
Type: CAZyme
Location: 54770 - 55897 (-)
Type: CAZyme
Location: 54770 - 55897 (-)
Gene ID: k141_3328_43
Type: pfam
Location: 55919 - 56857 (-)
Type: pfam
Location: 55919 - 56857 (-)
Gene ID: k141_3328_44
Type: pfam
Location: 56867 - 58321 (-)
Type: pfam
Location: 56867 - 58321 (-)
Gene ID: k141_3328_45
Type: TC
Location: 58358 - 61522 (-)
Type: TC
Location: 58358 - 61522 (-)
Gene ID: k141_3328_46
Type: pfam
Location: 61607 - 62518 (-)
Type: pfam
Location: 61607 - 62518 (-)
Gene ID: k141_3328_47
Type: TC
Location: 62523 - 65114 (-)
Type: TC
Location: 62523 - 65114 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.