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Cluster: CGMR024118_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_57481 k141_57481_38 44046 45194 + 1.B.6.1.6
TC k141_57481 k141_57481_39 45295 46692 + 9.B.18.1.1
pfam k141_57481 k141_57481_40 46743 47183 + RuvX
pfam k141_57481 k141_57481_41 47189 47746 + Pep_deformylase
TC k141_57481 k141_57481_42 47771 49318 + 3.B.1.1.5
pfam k141_57481 k141_57481_43 49343 49675 + Biotin_lipoyl | Biotin_lipoyl_2
STP k141_57481 k141_57481_44 49813 51936 + TPR_1 | TPR_1 | TPR_1 | TPR_1 | TPR_1
CAZyme k141_57481 k141_57481_45 52464 54413 - GT10 | GT2
Gene ID: k141_57481_38
Type: TC
Location: 44046 - 45194 (+)
Gene ID: k141_57481_39
Type: TC
Location: 45295 - 46692 (+)
Gene ID: k141_57481_40
Type: pfam
Location: 46743 - 47183 (+)
Gene ID: k141_57481_41
Type: pfam
Location: 47189 - 47746 (+)
Gene ID: k141_57481_42
Type: TC
Location: 47771 - 49318 (+)
Gene ID: k141_57481_43
Type: pfam
Location: 49343 - 49675 (+)
Gene ID: k141_57481_44
Type: STP
Location: 49813 - 51936 (+)
Gene ID: k141_57481_45
Type: CAZyme
Location: 52464 - 54413 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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