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Cluster: CGMR024118_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_4545 k141_4545_30 37517 39172 + 4.C.1.1.7
pfam k141_4545 k141_4545_31 39262 40635 + AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | KARI_N
NULL(UNKNOWN) k141_4545 k141_4545_32 40646 42202 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_4545 k141_4545_33 42222 42965 + GT2
pfam k141_4545 k141_4545_34 43633 44211 + PRiA4_ORF3
pfam k141_4545 k141_4545_35 44214 44678 + UPF0158
CAZyme k141_4545 k141_4545_36 44707 45705 + GT2
TC k141_4545 k141_4545_37 45833 48352 - 9.B.144.1.4
CAZyme k141_4545 k141_4545_38 48378 49136 - GT2
Gene ID: k141_4545_30
Type: TC
Location: 37517 - 39172 (+)
Gene ID: k141_4545_31
Type: pfam
Location: 39262 - 40635 (+)
Gene ID: k141_4545_32
Type:
Location: 40646 - 42202 (+)
Gene ID: k141_4545_33
Type: CAZyme
Location: 42222 - 42965 (+)
Gene ID: k141_4545_34
Type: pfam
Location: 43633 - 44211 (+)
Gene ID: k141_4545_35
Type: pfam
Location: 44214 - 44678 (+)
Gene ID: k141_4545_36
Type: CAZyme
Location: 44707 - 45705 (+)
Gene ID: k141_4545_37
Type: TC
Location: 45833 - 48352 (-)
Gene ID: k141_4545_38
Type: CAZyme
Location: 48378 - 49136 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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