Cluster: CGMR024118_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR024118
- CGC Family ID: CGCFAM_02082
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_4545 | k141_4545_12 | 11634 | 13955 | + | GH92 |
| CAZyme | k141_4545 | k141_4545_13 | 13970 | 15622 | + | GH156 |
| NULL(UNKNOWN) | k141_4545 | k141_4545_14 | 15810 | 15920 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_4545 | k141_4545_15 | 15871 | 16026 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_4545 | k141_4545_16 | 16315 | 17784 | - | GH28 |
| CAZyme | k141_4545 | k141_4545_17 | 17792 | 20695 | - | GH106 |
| CAZyme | k141_4545 | k141_4545_18 | 20711 | 21463 | - | GH28 |
| CAZyme | k141_4545 | k141_4545_19 | 21482 | 22960 | - | GH28 |
| pfam | k141_4545 | k141_4545_20 | 23123 | 24550 | + | PD40 | PD40 |
| pfam | k141_4545 | k141_4545_21 | 24564 | 26249 | + | DUF6057 |
| TC | k141_4545 | k141_4545_22 | 26312 | 28153 | - | 8.A.46.1.6 |
| TC | k141_4545 | k141_4545_23 | 28167 | 31325 | - | 1.B.14.6.1 |
Gene ID: k141_4545_12
Type: CAZyme
Location: 11634 - 13955 (+)
Type: CAZyme
Location: 11634 - 13955 (+)
Gene ID: k141_4545_13
Type: CAZyme
Location: 13970 - 15622 (+)
Type: CAZyme
Location: 13970 - 15622 (+)
Gene ID: k141_4545_14
Type:
Location: 15810 - 15920 (+)
Type:
Location: 15810 - 15920 (+)
Gene ID: k141_4545_15
Type:
Location: 15871 - 16026 (-)
Type:
Location: 15871 - 16026 (-)
Gene ID: k141_4545_16
Type: CAZyme
Location: 16315 - 17784 (-)
Type: CAZyme
Location: 16315 - 17784 (-)
Gene ID: k141_4545_17
Type: CAZyme
Location: 17792 - 20695 (-)
Type: CAZyme
Location: 17792 - 20695 (-)
Gene ID: k141_4545_18
Type: CAZyme
Location: 20711 - 21463 (-)
Type: CAZyme
Location: 20711 - 21463 (-)
Gene ID: k141_4545_19
Type: CAZyme
Location: 21482 - 22960 (-)
Type: CAZyme
Location: 21482 - 22960 (-)
Gene ID: k141_4545_20
Type: pfam
Location: 23123 - 24550 (+)
Type: pfam
Location: 23123 - 24550 (+)
Gene ID: k141_4545_21
Type: pfam
Location: 24564 - 26249 (+)
Type: pfam
Location: 24564 - 26249 (+)
Gene ID: k141_4545_22
Type: TC
Location: 26312 - 28153 (-)
Type: TC
Location: 26312 - 28153 (-)
Gene ID: k141_4545_23
Type: TC
Location: 28167 - 31325 (-)
Type: TC
Location: 28167 - 31325 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_4545_17 | vegetarian > omnivore | 1.21344 | 0.00050 |
| k141_4545_18 | vegetarian > omnivore | 1.36216 | 0.00050 |
| k141_4545_19 | vegetarian > omnivore | 1.33063 | 0.00050 |
| k141_4545_20 | vegetarian > omnivore | 1.37849 | 0.00050 |
| k141_4545_21 | vegetarian > omnivore | 1.55497 | 0.00050 |
| k141_4545_23 | vegetarian > omnivore | 1.16894 | 0.00050 |