Cluster: CGMR024035_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR024035
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_205761 | k141_205761_18 | 24939 | 27197 | + | 1.I.1.1.3 |
| STP | k141_205761 | k141_205761_19 | 27819 | 28580 | + | Fer4 |
| TC | k141_205761 | k141_205761_20 | 28924 | 29436 | + | 4.A.1.2.5 |
| pfam | k141_205761 | k141_205761_21 | 29443 | 30309 | + | PRD | PRD | CAT_RBD |
| TC | k141_205761 | k141_205761_22 | 30409 | 32025 | + | 4.A.1.1.3 |
| CAZyme | k141_205761 | k141_205761_23 | 32029 | 33411 | + | GH4 |
Gene ID: k141_205761_18
Type: TC
Location: 24939 - 27197 (+)
Type: TC
Location: 24939 - 27197 (+)
Gene ID: k141_205761_19
Type: STP
Location: 27819 - 28580 (+)
Type: STP
Location: 27819 - 28580 (+)
Gene ID: k141_205761_20
Type: TC
Location: 28924 - 29436 (+)
Type: TC
Location: 28924 - 29436 (+)
Gene ID: k141_205761_21
Type: pfam
Location: 29443 - 30309 (+)
Type: pfam
Location: 29443 - 30309 (+)
Gene ID: k141_205761_22
Type: TC
Location: 30409 - 32025 (+)
Type: TC
Location: 30409 - 32025 (+)
Gene ID: k141_205761_23
Type: CAZyme
Location: 32029 - 33411 (+)
Type: CAZyme
Location: 32029 - 33411 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp019041915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.