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Cluster: CGMR023759_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_82612 k141_82612_16 15095 17491 + GH2
TF k141_82612 k141_82612_17 17528 18349 + HTH_AraC
pfam k141_82612 k141_82612_18 18346 19014 + DUF624
CAZyme k141_82612 k141_82612_19 19063 20931 - GH20
TC k141_82612 k141_82612_20 21281 22279 + 3.A.1.1.29
TC k141_82612 k141_82612_21 22303 23250 + 3.A.1.1.29
pfam k141_82612 k141_82612_22 23330 24922 + DUF3502
CAZyme k141_82612 k141_82612_23 25118 28264 + GH38
CAZyme k141_82612 k141_82612_24 28324 30561 + GH3
Gene ID: k141_82612_16
Type: CAZyme
Location: 15095 - 17491 (+)
Gene ID: k141_82612_17
Type: TF
Location: 17528 - 18349 (+)
Gene ID: k141_82612_18
Type: pfam
Location: 18346 - 19014 (+)
Gene ID: k141_82612_19
Type: CAZyme
Location: 19063 - 20931 (-)
Gene ID: k141_82612_20
Type: TC
Location: 21281 - 22279 (+)
Gene ID: k141_82612_21
Type: TC
Location: 22303 - 23250 (+)
Gene ID: k141_82612_22
Type: pfam
Location: 23330 - 24922 (+)
Gene ID: k141_82612_23
Type: CAZyme
Location: 25118 - 28264 (+)
Gene ID: k141_82612_24
Type: CAZyme
Location: 28324 - 30561 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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