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Cluster: CGMR023759_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_201577 k141_201577_22 24578 25741 - GH33
pfam k141_201577 k141_201577_23 25809 27068 - SBD_N | NBD_C
TF k141_201577 k141_201577_24 27306 29123 + HTH_8
TC k141_201577 k141_201577_25 29132 30496 + 2.A.66.1.33
pfam k141_201577 k141_201577_26 30789 31292 - MoCF_biosynth
TC k141_201577 k141_201577_27 31307 32362 - 3.A.1.19.5
TC k141_201577 k141_201577_28 32364 33026 - 3.A.1.8.2
Gene ID: k141_201577_22
Type: CAZyme
Location: 24578 - 25741 (-)
Gene ID: k141_201577_23
Type: pfam
Location: 25809 - 27068 (-)
Gene ID: k141_201577_24
Type: TF
Location: 27306 - 29123 (+)
Gene ID: k141_201577_25
Type: TC
Location: 29132 - 30496 (+)
Gene ID: k141_201577_26
Type: pfam
Location: 30789 - 31292 (-)
Gene ID: k141_201577_27
Type: TC
Location: 31307 - 32362 (-)
Gene ID: k141_201577_28
Type: TC
Location: 32364 - 33026 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_201577_22 vegan > omnivore 2.18114 0.00701

🧭 Explore Read Mapping of CGC

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