Cluster: CGMR023759_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023759
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5569 | k141_5569_24 | 21877 | 22557 | - | 2.A.38.4.4 |
| TC | k141_5569 | k141_5569_25 | 22574 | 23872 | - | 2.A.38.4.3 |
| pfam | k141_5569 | k141_5569_26 | 23962 | 25206 | - | IMS | IMS_C |
| TC | k141_5569 | k141_5569_27 | 25299 | 25883 | - | 2.A.87.1.3 |
| pfam | k141_5569 | k141_5569_28 | 26212 | 26718 | + | YpsA |
| TC | k141_5569 | k141_5569_29 | 26778 | 28145 | - | 2.A.66.1.4 |
| CAZyme | k141_5569 | k141_5569_30 | 28371 | 29696 | - | CE4 |
Gene ID: k141_5569_24
Type: TC
Location: 21877 - 22557 (-)
Type: TC
Location: 21877 - 22557 (-)
Gene ID: k141_5569_25
Type: TC
Location: 22574 - 23872 (-)
Type: TC
Location: 22574 - 23872 (-)
Gene ID: k141_5569_26
Type: pfam
Location: 23962 - 25206 (-)
Type: pfam
Location: 23962 - 25206 (-)
Gene ID: k141_5569_27
Type: TC
Location: 25299 - 25883 (-)
Type: TC
Location: 25299 - 25883 (-)
Gene ID: k141_5569_28
Type: pfam
Location: 26212 - 26718 (+)
Type: pfam
Location: 26212 - 26718 (+)
Gene ID: k141_5569_29
Type: TC
Location: 26778 - 28145 (-)
Type: TC
Location: 26778 - 28145 (-)
Gene ID: k141_5569_30
Type: CAZyme
Location: 28371 - 29696 (-)
Type: CAZyme
Location: 28371 - 29696 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas intestinigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_5569_27 | vegetarian > vegan | 1.88672 | 0.00364 |
| k141_5569_28 | vegetarian > vegan | 1.06925 | 0.00364 |