Cluster: CGMR023733_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR023733
- CGC Family ID: CGCFAM_02196
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_211469 | k141_211469_1 | 3 | 1193 | - | GH31_15 |
| TC | k141_211469 | k141_211469_2 | 1383 | 2363 | - | 3.A.1.1.10 |
| TC | k141_211469 | k141_211469_3 | 2377 | 3339 | - | 3.A.1.1.10 |
| CAZyme | k141_211469 | k141_211469_4 | 3356 | 5152 | - | GH13_31 |
| TC | k141_211469 | k141_211469_5 | 5320 | 6957 | - | 3.A.1.1.10 |
| TF | k141_211469 | k141_211469_6 | 7161 | 8180 | + | LacI |
| CAZyme | k141_211469 | k141_211469_7 | 8411 | 11653 | + | GH49 |
| TC | k141_211469 | k141_211469_8 | 11987 | 13000 | + | 1.I.1.1.3 |
Gene ID: k141_211469_1
Type: CAZyme
Location: 3 - 1193 (-)
Type: CAZyme
Location: 3 - 1193 (-)
Gene ID: k141_211469_2
Type: TC
Location: 1383 - 2363 (-)
Type: TC
Location: 1383 - 2363 (-)
Gene ID: k141_211469_3
Type: TC
Location: 2377 - 3339 (-)
Type: TC
Location: 2377 - 3339 (-)
Gene ID: k141_211469_4
Type: CAZyme
Location: 3356 - 5152 (-)
Type: CAZyme
Location: 3356 - 5152 (-)
Gene ID: k141_211469_5
Type: TC
Location: 5320 - 6957 (-)
Type: TC
Location: 5320 - 6957 (-)
Gene ID: k141_211469_6
Type: TF
Location: 7161 - 8180 (+)
Type: TF
Location: 7161 - 8180 (+)
Gene ID: k141_211469_7
Type: CAZyme
Location: 8411 - 11653 (+)
Type: CAZyme
Location: 8411 - 11653 (+)
Gene ID: k141_211469_8
Type: TC
Location: 11987 - 13000 (+)
Type: TC
Location: 11987 - 13000 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium crudilactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.