Cluster: CGMR023733_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023733
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_406747 | k141_406747_2 | 448 | 2529 | - | GH42 |
| TC | k141_406747 | k141_406747_3 | 2693 | 3724 | - | 3.A.1.1.48 |
| TC | k141_406747 | k141_406747_4 | 3721 | 4647 | - | 3.A.1.1.48 |
Gene ID: k141_406747_2
Type: CAZyme
Location: 448 - 2529 (-)
Type: CAZyme
Location: 448 - 2529 (-)
Gene ID: k141_406747_3
Type: TC
Location: 2693 - 3724 (-)
Type: TC
Location: 2693 - 3724 (-)
Gene ID: k141_406747_4
Type: TC
Location: 3721 - 4647 (-)
Type: TC
Location: 3721 - 4647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium crudilactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_406747_4 | vegan > omnivore | 1.16608 | 0.03673 |
| k141_406747_4 | vegetarian > omnivore | 1.13778 | 0.02677 |