Cluster: CGMR023733_CGC32
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR023733
- CGC Family ID: CGCFAM_02196
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_74001 | k141_74001_4 | 6570 | 9791 | - | GH49 |
| TF | k141_74001 | k141_74001_5 | 10018 | 11031 | - | LacI |
| TC | k141_74001 | k141_74001_6 | 11233 | 12867 | + | 3.A.1.1.10 |
| CAZyme | k141_74001 | k141_74001_7 | 12995 | 14815 | + | GH13_31 |
| TC | k141_74001 | k141_74001_8 | 14829 | 15788 | + | 3.A.1.1.10 |
| TC | k141_74001 | k141_74001_9 | 15800 | 16768 | + | 3.A.1.1.10 |
| CAZyme | k141_74001 | k141_74001_10 | 17039 | 19471 | + | GH31_15 |
| TC | k141_74001 | k141_74001_11 | 19583 | 20278 | + | 9.B.28.1.10 |
Gene ID: k141_74001_4
Type: CAZyme
Location: 6570 - 9791 (-)
Type: CAZyme
Location: 6570 - 9791 (-)
Gene ID: k141_74001_5
Type: TF
Location: 10018 - 11031 (-)
Type: TF
Location: 10018 - 11031 (-)
Gene ID: k141_74001_6
Type: TC
Location: 11233 - 12867 (+)
Type: TC
Location: 11233 - 12867 (+)
Gene ID: k141_74001_7
Type: CAZyme
Location: 12995 - 14815 (+)
Type: CAZyme
Location: 12995 - 14815 (+)
Gene ID: k141_74001_8
Type: TC
Location: 14829 - 15788 (+)
Type: TC
Location: 14829 - 15788 (+)
Gene ID: k141_74001_9
Type: TC
Location: 15800 - 16768 (+)
Type: TC
Location: 15800 - 16768 (+)
Gene ID: k141_74001_10
Type: CAZyme
Location: 17039 - 19471 (+)
Type: CAZyme
Location: 17039 - 19471 (+)
Gene ID: k141_74001_11
Type: TC
Location: 19583 - 20278 (+)
Type: TC
Location: 19583 - 20278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium crudilactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.