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Cluster: CGMR023733_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_343221 k141_343221_8 8453 9382 + 3.A.1.1.20
TC k141_343221 k141_343221_9 9379 10194 + 3.A.1.1.36
CAZyme k141_343221 k141_343221_10 10245 12788 + GH31_15
pfam k141_343221 k141_343221_11 12973 13368 + Ribonuc_L-PSP
CAZyme k141_343221 k141_343221_12 13522 15951 - GH3
TC k141_343221 k141_343221_13 16452 17402 + 3.A.1.1.29
TC k141_343221 k141_343221_14 17412 18338 + 3.A.1.1.29
NULL(UNKNOWN) k141_343221 k141_343221_15 18465 20090 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_343221 k141_343221_16 20276 21670 + GH30_3
Gene ID: k141_343221_8
Type: TC
Location: 8453 - 9382 (+)
Gene ID: k141_343221_9
Type: TC
Location: 9379 - 10194 (+)
Gene ID: k141_343221_10
Type: CAZyme
Location: 10245 - 12788 (+)
Gene ID: k141_343221_11
Type: pfam
Location: 12973 - 13368 (+)
Gene ID: k141_343221_12
Type: CAZyme
Location: 13522 - 15951 (-)
Gene ID: k141_343221_13
Type: TC
Location: 16452 - 17402 (+)
Gene ID: k141_343221_14
Type: TC
Location: 17412 - 18338 (+)
Gene ID: k141_343221_15
Type:
Location: 18465 - 20090 (+)
Gene ID: k141_343221_16
Type: CAZyme
Location: 20276 - 21670 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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