Cluster: CGMR023733_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023733
- CGC Family ID: CGCFAM_02435
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_203445 | k141_203445_1 | 3 | 929 | + | 2.A.1.2.93 |
| TC | k141_203445 | k141_203445_2 | 1459 | 2886 | + | 2.A.1.6.10 |
| pfam | k141_203445 | k141_203445_3 | 3240 | 4292 | + | KARI_C | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | KARI_N |
| CAZyme | k141_203445 | k141_203445_4 | 4524 | 6527 | - | GH32 |
| TC | k141_203445 | k141_203445_5 | 6653 | 8164 | - | 2.A.3.1.3 |
| TC | k141_203445 | k141_203445_6 | 8408 | 9109 | + | 3.A.1.125.2 |
Gene ID: k141_203445_1
Type: TC
Location: 3 - 929 (+)
Type: TC
Location: 3 - 929 (+)
Gene ID: k141_203445_2
Type: TC
Location: 1459 - 2886 (+)
Type: TC
Location: 1459 - 2886 (+)
Gene ID: k141_203445_3
Type: pfam
Location: 3240 - 4292 (+)
Type: pfam
Location: 3240 - 4292 (+)
Gene ID: k141_203445_4
Type: CAZyme
Location: 4524 - 6527 (-)
Type: CAZyme
Location: 4524 - 6527 (-)
Gene ID: k141_203445_5
Type: TC
Location: 6653 - 8164 (-)
Type: TC
Location: 6653 - 8164 (-)
Gene ID: k141_203445_6
Type: TC
Location: 8408 - 9109 (+)
Type: TC
Location: 8408 - 9109 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium crudilactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.