Cluster: CGMR023733_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023733
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_243059 | k141_243059_22 | 20294 | 22417 | + | 4.A.1.2.5 |
| pfam | k141_243059 | k141_243059_23 | 22469 | 23332 | + | PRD | PRD | CAT_RBD |
| STP | k141_243059 | k141_243059_24 | 23465 | 23731 | + | PTS-HPr |
| TC | k141_243059 | k141_243059_25 | 23721 | 25427 | + | 8.A.7.1.2 |
| TF | k141_243059 | k141_243059_26 | 25590 | 26477 | - | HTH_AraC | HTH_AraC |
| TC | k141_243059 | k141_243059_27 | 26639 | 27829 | - | 2.A.1.68.1 |
| CAZyme | k141_243059 | k141_243059_28 | 27924 | 30191 | - | GH36 |
Gene ID: k141_243059_22
Type: TC
Location: 20294 - 22417 (+)
Type: TC
Location: 20294 - 22417 (+)
Gene ID: k141_243059_23
Type: pfam
Location: 22469 - 23332 (+)
Type: pfam
Location: 22469 - 23332 (+)
Gene ID: k141_243059_24
Type: STP
Location: 23465 - 23731 (+)
Type: STP
Location: 23465 - 23731 (+)
Gene ID: k141_243059_25
Type: TC
Location: 23721 - 25427 (+)
Type: TC
Location: 23721 - 25427 (+)
Gene ID: k141_243059_26
Type: TF
Location: 25590 - 26477 (-)
Type: TF
Location: 25590 - 26477 (-)
Gene ID: k141_243059_27
Type: TC
Location: 26639 - 27829 (-)
Type: TC
Location: 26639 - 27829 (-)
Gene ID: k141_243059_28
Type: CAZyme
Location: 27924 - 30191 (-)
Type: CAZyme
Location: 27924 - 30191 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium crudilactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.