Cluster: CGMR023733_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023733
- CGC Family ID: CGCFAM_00991
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_288756 | k141_288756_6 | 6283 | 7161 | + | 3.A.1.15.8 |
| TC | k141_288756 | k141_288756_7 | 7158 | 7991 | + | 3.A.1.15.2 |
| pfam | k141_288756 | k141_288756_8 | 8198 | 8731 | - | YgbB |
| pfam | k141_288756 | k141_288756_9 | 8829 | 9422 | - | CarD_TRCF_RID | CarD_C |
| CAZyme | k141_288756 | k141_288756_10 | 9626 | 10684 | + | CBM48 |
Gene ID: k141_288756_6
Type: TC
Location: 6283 - 7161 (+)
Type: TC
Location: 6283 - 7161 (+)
Gene ID: k141_288756_7
Type: TC
Location: 7158 - 7991 (+)
Type: TC
Location: 7158 - 7991 (+)
Gene ID: k141_288756_8
Type: pfam
Location: 8198 - 8731 (-)
Type: pfam
Location: 8198 - 8731 (-)
Gene ID: k141_288756_9
Type: pfam
Location: 8829 - 9422 (-)
Type: pfam
Location: 8829 - 9422 (-)
Gene ID: k141_288756_10
Type: CAZyme
Location: 9626 - 10684 (+)
Type: CAZyme
Location: 9626 - 10684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium crudilactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.