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Cluster: CGMR023724_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_19938 k141_19938_3 1159 2490 - GH28
CAZyme k141_19938 k141_19938_4 2501 5629 - GH106
TC k141_19938 k141_19938_5 5792 7117 - 3.A.1.1.46
TC k141_19938 k141_19938_6 7162 7995 - 3.A.1.1.41
TC k141_19938 k141_19938_7 7995 8921 - 3.A.1.1.7
CAZyme k141_19938 k141_19938_8 9355 11919 - GH106
pfam k141_19938 k141_19938_9 11939 12703 - Lipase_GDSL | Lipase_GDSL_2
TF k141_19938 k141_19938_10 12706 13893 - HTH_AraC
TC k141_19938 k141_19938_11 13890 15704 - 8.A.59.2.1
CAZyme k141_19938 k141_19938_12 15720 17123 - GH4
TF k141_19938 k141_19938_13 17292 18146 + HTH_AraC | HTH_AraC
TC k141_19938 k141_19938_14 18153 19514 - 2.A.66.1.34
TC k141_19938 k141_19938_15 19493 20461 - 2.A.7.3.53
Gene ID: k141_19938_3
Type: CAZyme
Location: 1159 - 2490 (-)
Gene ID: k141_19938_4
Type: CAZyme
Location: 2501 - 5629 (-)
Gene ID: k141_19938_5
Type: TC
Location: 5792 - 7117 (-)
Gene ID: k141_19938_6
Type: TC
Location: 7162 - 7995 (-)
Gene ID: k141_19938_7
Type: TC
Location: 7995 - 8921 (-)
Gene ID: k141_19938_8
Type: CAZyme
Location: 9355 - 11919 (-)
Gene ID: k141_19938_9
Type: pfam
Location: 11939 - 12703 (-)
Gene ID: k141_19938_10
Type: TF
Location: 12706 - 13893 (-)
Gene ID: k141_19938_11
Type: TC
Location: 13890 - 15704 (-)
Gene ID: k141_19938_12
Type: CAZyme
Location: 15720 - 17123 (-)
Gene ID: k141_19938_13
Type: TF
Location: 17292 - 18146 (+)
Gene ID: k141_19938_14
Type: TC
Location: 18153 - 19514 (-)
Gene ID: k141_19938_15
Type: TC
Location: 19493 - 20461 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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