Cluster: CGMR023724_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023724
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_19813 | k141_19813_31 | 33165 | 34298 | - | CE9 |
| TC | k141_19813 | k141_19813_32 | 34373 | 35635 | - | 4.A.5.1.7 |
| TF | k141_19813 | k141_19813_33 | 35903 | 36247 | + | HTH_DeoR |
| pfam | k141_19813 | k141_19813_34 | 36323 | 38020 | + | PTS_EIIA_2 | PRD | PRD |
| TC | k141_19813 | k141_19813_35 | 38022 | 38282 | + | 8.A.8.1.5 |
| TC | k141_19813 | k141_19813_36 | 38227 | 40047 | + | 8.A.7.1.1 |
Gene ID: k141_19813_31
Type: CAZyme
Location: 33165 - 34298 (-)
Type: CAZyme
Location: 33165 - 34298 (-)
Gene ID: k141_19813_32
Type: TC
Location: 34373 - 35635 (-)
Type: TC
Location: 34373 - 35635 (-)
Gene ID: k141_19813_33
Type: TF
Location: 35903 - 36247 (+)
Type: TF
Location: 35903 - 36247 (+)
Gene ID: k141_19813_34
Type: pfam
Location: 36323 - 38020 (+)
Type: pfam
Location: 36323 - 38020 (+)
Gene ID: k141_19813_35
Type: TC
Location: 38022 - 38282 (+)
Type: TC
Location: 38022 - 38282 (+)
Gene ID: k141_19813_36
Type: TC
Location: 38227 - 40047 (+)
Type: TC
Location: 38227 - 40047 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.