Cluster: CGMR023724_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023724
- CGC Family ID: CGCFAM_03768
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_146343 | k141_146343_48 | 48062 | 48730 | + | GT51 |
| TC | k141_146343 | k141_146343_49 | 48817 | 50184 | + | 9.A.11.1.1 |
| NULL(UNKNOWN) | k141_146343 | k141_146343_50 | 50268 | 50435 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_146343 | k141_146343_51 | 50455 | 51318 | + | DegV |
| TC | k141_146343 | k141_146343_52 | 51409 | 52764 | - | 2.A.22.5.3 |
| TC | k141_146343 | k141_146343_53 | 52868 | 54214 | - | 2.A.22.5.2 |
Gene ID: k141_146343_48
Type: CAZyme
Location: 48062 - 48730 (+)
Type: CAZyme
Location: 48062 - 48730 (+)
Gene ID: k141_146343_49
Type: TC
Location: 48817 - 50184 (+)
Type: TC
Location: 48817 - 50184 (+)
Gene ID: k141_146343_50
Type:
Location: 50268 - 50435 (+)
Type:
Location: 50268 - 50435 (+)
Gene ID: k141_146343_51
Type: pfam
Location: 50455 - 51318 (+)
Type: pfam
Location: 50455 - 51318 (+)
Gene ID: k141_146343_52
Type: TC
Location: 51409 - 52764 (-)
Type: TC
Location: 51409 - 52764 (-)
Gene ID: k141_146343_53
Type: TC
Location: 52868 - 54214 (-)
Type: TC
Location: 52868 - 54214 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.