Cluster: CGMR023473_CGC8
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR023473
- CGC Family ID: CGCFAM_01602
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_228069 | k141_228069_4 | 2716 | 5370 | + | GH31_7 |
| pfam | k141_228069 | k141_228069_5 | 5391 | 7202 | + | Glyco_hydro_125 |
| CAZyme | k141_228069 | k141_228069_6 | 7493 | 9376 | + | GH65 |
| NULL(UNKNOWN) | k141_228069 | k141_228069_7 | 9501 | 11012 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_228069 | k141_228069_8 | 11134 | 14040 | + | SBP_bac_1 |
| TC | k141_228069 | k141_228069_9 | 14037 | 14972 | + | 3.A.1.1.34 |
| TC | k141_228069 | k141_228069_10 | 14972 | 15922 | + | 3.A.1.1.39 |
| pfam | k141_228069 | k141_228069_11 | 15933 | 17999 | + | Yip1 | TPR_16 |
| pfam | k141_228069 | k141_228069_12 | 17986 | 20271 | + | DUF5696 |
| TC | k141_228069 | k141_228069_13 | 20286 | 21191 | + | 3.A.1.1.11 |
| TC | k141_228069 | k141_228069_14 | 21188 | 22126 | + | 3.A.1.1.48 |
| CAZyme | k141_228069 | k141_228069_15 | 22129 | 24816 | + | GH31_7 |
| CAZyme | k141_228069 | k141_228069_16 | 24842 | 27250 | + | GH31_15 |
| CAZyme | k141_228069 | k141_228069_17 | 27262 | 30540 | + | CBM35 | GH31_7 |
| CAZyme | k141_228069 | k141_228069_18 | 30577 | 34425 | + | CBM35 | CBM35 | CBM61 | GH31_10 |
Gene ID: k141_228069_4
Type: CAZyme
Location: 2716 - 5370 (+)
Type: CAZyme
Location: 2716 - 5370 (+)
Gene ID: k141_228069_5
Type: pfam
Location: 5391 - 7202 (+)
Type: pfam
Location: 5391 - 7202 (+)
Gene ID: k141_228069_6
Type: CAZyme
Location: 7493 - 9376 (+)
Type: CAZyme
Location: 7493 - 9376 (+)
Gene ID: k141_228069_7
Type:
Location: 9501 - 11012 (+)
Type:
Location: 9501 - 11012 (+)
Gene ID: k141_228069_8
Type: STP
Location: 11134 - 14040 (+)
Type: STP
Location: 11134 - 14040 (+)
Gene ID: k141_228069_9
Type: TC
Location: 14037 - 14972 (+)
Type: TC
Location: 14037 - 14972 (+)
Gene ID: k141_228069_10
Type: TC
Location: 14972 - 15922 (+)
Type: TC
Location: 14972 - 15922 (+)
Gene ID: k141_228069_11
Type: pfam
Location: 15933 - 17999 (+)
Type: pfam
Location: 15933 - 17999 (+)
Gene ID: k141_228069_12
Type: pfam
Location: 17986 - 20271 (+)
Type: pfam
Location: 17986 - 20271 (+)
Gene ID: k141_228069_13
Type: TC
Location: 20286 - 21191 (+)
Type: TC
Location: 20286 - 21191 (+)
Gene ID: k141_228069_14
Type: TC
Location: 21188 - 22126 (+)
Type: TC
Location: 21188 - 22126 (+)
Gene ID: k141_228069_15
Type: CAZyme
Location: 22129 - 24816 (+)
Type: CAZyme
Location: 22129 - 24816 (+)
Gene ID: k141_228069_16
Type: CAZyme
Location: 24842 - 27250 (+)
Type: CAZyme
Location: 24842 - 27250 (+)
Gene ID: k141_228069_17
Type: CAZyme
Location: 27262 - 30540 (+)
Type: CAZyme
Location: 27262 - 30540 (+)
Gene ID: k141_228069_18
Type: CAZyme
Location: 30577 - 34425 (+)
Type: CAZyme
Location: 30577 - 34425 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900546485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.