Cluster: CGMR023473_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023473
- CGC Family ID: CGCFAM_04705
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_217575 | k141_217575_21 | 19759 | 20418 | - | 1.A.62.2.1 |
| pfam | k141_217575 | k141_217575_22 | 20432 | 21058 | - | Lactamase_B_3 |
| CAZyme | k141_217575 | k141_217575_23 | 21178 | 22308 | + | GH24 |
| TF | k141_217575 | k141_217575_24 | 22359 | 22796 | - | TrmB |
| pfam | k141_217575 | k141_217575_25 | 22908 | 23762 | + | DegV |
| TC | k141_217575 | k141_217575_26 | 23964 | 25574 | + | 2.A.66.2.14 |
Gene ID: k141_217575_21
Type: TC
Location: 19759 - 20418 (-)
Type: TC
Location: 19759 - 20418 (-)
Gene ID: k141_217575_22
Type: pfam
Location: 20432 - 21058 (-)
Type: pfam
Location: 20432 - 21058 (-)
Gene ID: k141_217575_23
Type: CAZyme
Location: 21178 - 22308 (+)
Type: CAZyme
Location: 21178 - 22308 (+)
Gene ID: k141_217575_24
Type: TF
Location: 22359 - 22796 (-)
Type: TF
Location: 22359 - 22796 (-)
Gene ID: k141_217575_25
Type: pfam
Location: 22908 - 23762 (+)
Type: pfam
Location: 22908 - 23762 (+)
Gene ID: k141_217575_26
Type: TC
Location: 23964 - 25574 (+)
Type: TC
Location: 23964 - 25574 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900546485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_217575_23 | vegetarian > vegan | 1.81728 | 0.01560 |
| k141_217575_24 | vegetarian > vegan | 1.73236 | 0.01560 |
| k141_217575_25 | vegetarian > vegan | 1.99520 | 0.01560 |
| k141_217575_26 | vegetarian > vegan | 1.31916 | 0.01560 |