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Cluster: CGMR023473_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_283452 k141_283452_33 34316 35842 - 3.A.1.120.2
CAZyme k141_283452 k141_283452_34 36066 37820 - GH31_7
TC k141_283452 k141_283452_35 37830 38657 - 3.A.1.1.39
TC k141_283452 k141_283452_36 38647 39570 - 3.A.1.1.11
TC k141_283452 k141_283452_37 39657 40964 - 3.A.1.1.44
TF k141_283452 k141_283452_38 41141 42160 - LacI
pfam k141_283452 k141_283452_39 42352 44130 + Glyco_hydro_125
CAZyme k141_283452 k141_283452_40 44120 46258 + GH65
Gene ID: k141_283452_33
Type: TC
Location: 34316 - 35842 (-)
Gene ID: k141_283452_34
Type: CAZyme
Location: 36066 - 37820 (-)
Gene ID: k141_283452_35
Type: TC
Location: 37830 - 38657 (-)
Gene ID: k141_283452_36
Type: TC
Location: 38647 - 39570 (-)
Gene ID: k141_283452_37
Type: TC
Location: 39657 - 40964 (-)
Gene ID: k141_283452_38
Type: TF
Location: 41141 - 42160 (-)
Gene ID: k141_283452_39
Type: pfam
Location: 42352 - 44130 (+)
Gene ID: k141_283452_40
Type: CAZyme
Location: 44120 - 46258 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_283452_33 vegetarian > vegan 2.03578 0.01560
k141_283452_38 vegetarian > vegan 1.79977 0.01560
k141_283452_40 vegetarian > vegan 3.01822 0.01560

🧭 Explore Read Mapping of CGC

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