Cluster: CGMR023473_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR023473
- CGC Family ID: CGCFAM_00037
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_196927 | k141_196927_71 | 75789 | 77462 | + | CBM34 | GH13_20 |
| pfam | k141_196927 | k141_196927_72 | 77464 | 78948 | + | SBP_bac_1 |
| TC | k141_196927 | k141_196927_73 | 78987 | 80300 | + | 3.A.1.1.27 |
| TC | k141_196927 | k141_196927_74 | 80297 | 81145 | + | 3.A.1.1.27 |
| CAZyme | k141_196927 | k141_196927_75 | 81150 | 82664 | + | GH13_36 |
Gene ID: k141_196927_71
Type: CAZyme
Location: 75789 - 77462 (+)
Type: CAZyme
Location: 75789 - 77462 (+)
Gene ID: k141_196927_72
Type: pfam
Location: 77464 - 78948 (+)
Type: pfam
Location: 77464 - 78948 (+)
Gene ID: k141_196927_73
Type: TC
Location: 78987 - 80300 (+)
Type: TC
Location: 78987 - 80300 (+)
Gene ID: k141_196927_74
Type: TC
Location: 80297 - 81145 (+)
Type: TC
Location: 80297 - 81145 (+)
Gene ID: k141_196927_75
Type: CAZyme
Location: 81150 - 82664 (+)
Type: CAZyme
Location: 81150 - 82664 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900546485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_196927_71 | vegetarian > vegan | 1.60148 | 0.01560 |
| k141_196927_72 | vegetarian > vegan | 1.34872 | 0.01560 |
| k141_196927_73 | vegetarian > vegan | 1.61651 | 0.01560 |
| k141_196927_74 | vegetarian > vegan | 1.79292 | 0.01560 |
| k141_196927_75 | vegetarian > vegan | 1.41606 | 0.01560 |