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Cluster: CGMR023473_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_104940 k141_104940_9 4808 5644 - GT8
pfam k141_104940 k141_104940_10 5647 6189 - DUF308 | DUF308 | DUF308
NULL(UNKNOWN) k141_104940 k141_104940_11 6421 6918 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_104940 k141_104940_12 6920 8731 + 3.A.16.1.1
CAZyme k141_104940 k141_104940_13 8748 10562 + GH2
TC k141_104940 k141_104940_14 10617 11429 - 3.D.6.1.3
TC k141_104940 k141_104940_15 11443 12024 - 3.D.6.1.2
TC k141_104940 k141_104940_16 12024 12734 - 3.D.6.1.2
TC k141_104940 k141_104940_17 12749 13294 - 3.D.6.1.3
TC k141_104940 k141_104940_18 13287 14327 - 3.D.6.1.2
TC k141_104940 k141_104940_19 14327 15703 - 3.D.6.1.2
TC k141_104940 k141_104940_20 15995 17284 + 2.A.1.84.3
CAZyme k141_104940 k141_104940_21 17271 18992 + GH2
Gene ID: k141_104940_9
Type: CAZyme
Location: 4808 - 5644 (-)
Gene ID: k141_104940_10
Type: pfam
Location: 5647 - 6189 (-)
Gene ID: k141_104940_11
Type:
Location: 6421 - 6918 (+)
Gene ID: k141_104940_12
Type: TC
Location: 6920 - 8731 (+)
Gene ID: k141_104940_13
Type: CAZyme
Location: 8748 - 10562 (+)
Gene ID: k141_104940_14
Type: TC
Location: 10617 - 11429 (-)
Gene ID: k141_104940_15
Type: TC
Location: 11443 - 12024 (-)
Gene ID: k141_104940_16
Type: TC
Location: 12024 - 12734 (-)
Gene ID: k141_104940_17
Type: TC
Location: 12749 - 13294 (-)
Gene ID: k141_104940_18
Type: TC
Location: 13287 - 14327 (-)
Gene ID: k141_104940_19
Type: TC
Location: 14327 - 15703 (-)
Gene ID: k141_104940_20
Type: TC
Location: 15995 - 17284 (+)
Gene ID: k141_104940_21
Type: CAZyme
Location: 17271 - 18992 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_104940_14 vegetarian > omnivore 1.16246 0.00363
k141_104940_19 vegetarian > omnivore 1.45747 0.00363
k141_104940_20 vegetarian > vegan 1.19684 0.01560

🧭 Explore Read Mapping of CGC

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