Cluster: CGMR023309_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023309
- CGC Family ID: CGCFAM_02143
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4766 | k141_4766_39 | 42202 | 43938 | + | 3.A.1.135.7 |
| TC | k141_4766 | k141_4766_40 | 43947 | 45716 | + | 3.A.1.135.7 |
| pfam | k141_4766 | k141_4766_41 | 45829 | 46347 | + | RimM | PRC | PRC_RimM |
| pfam | k141_4766 | k141_4766_42 | 46337 | 47053 | + | tRNA_m1G_MT |
| CAZyme | k141_4766 | k141_4766_43 | 47195 | 48130 | - | CE4 |
Gene ID: k141_4766_39
Type: TC
Location: 42202 - 43938 (+)
Type: TC
Location: 42202 - 43938 (+)
Gene ID: k141_4766_40
Type: TC
Location: 43947 - 45716 (+)
Type: TC
Location: 43947 - 45716 (+)
Gene ID: k141_4766_41
Type: pfam
Location: 45829 - 46347 (+)
Type: pfam
Location: 45829 - 46347 (+)
Gene ID: k141_4766_42
Type: pfam
Location: 46337 - 47053 (+)
Type: pfam
Location: 46337 - 47053 (+)
Gene ID: k141_4766_43
Type: CAZyme
Location: 47195 - 48130 (-)
Type: CAZyme
Location: 47195 - 48130 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus suis_AA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.