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Cluster: CGMR023309_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_109957 k141_109957_20 19200 20201 + 3.A.1.34.1
TC k141_109957 k141_109957_21 20216 21082 + 3.A.1.34.1
TC k141_109957 k141_109957_22 21079 21837 + 3.A.1.34.1
pfam k141_109957 k141_109957_23 22134 22631 + tRNA_edit
pfam k141_109957 k141_109957_24 22963 24624 + Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP
CAZyme k141_109957 k141_109957_25 24685 25461 + CE1
peptidase k141_109957 k141_109957_26 25527 26225 + M10.UPW
NULL(UNKNOWN) k141_109957 k141_109957_27 26273 26629 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_109957 k141_109957_28 26737 28635 + 3.A.1.121.4
Gene ID: k141_109957_20
Type: TC
Location: 19200 - 20201 (+)
Gene ID: k141_109957_21
Type: TC
Location: 20216 - 21082 (+)
Gene ID: k141_109957_22
Type: TC
Location: 21079 - 21837 (+)
Gene ID: k141_109957_23
Type: pfam
Location: 22134 - 22631 (+)
Gene ID: k141_109957_24
Type: pfam
Location: 22963 - 24624 (+)
Gene ID: k141_109957_25
Type: CAZyme
Location: 24685 - 25461 (+)
Gene ID: k141_109957_26
Type: peptidase
Location: 25527 - 26225 (+)
Gene ID: k141_109957_27
Type:
Location: 26273 - 26629 (+)
Gene ID: k141_109957_28
Type: TC
Location: 26737 - 28635 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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