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Cluster: CGMR023309_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_109750 k141_109750_3 4633 5331 + 8.A.3.2.3
TC k141_109750 k141_109750_4 5341 6036 + 8.A.3.2.2
pfam k141_109750 k141_109750_5 6076 6798 + CpsB_CapC
TC k141_109750 k141_109750_6 6904 8280 + 9.B.18.1.2
pfam k141_109750 k141_109750_7 8289 8738 + Alg14
pfam k141_109750 k141_109750_8 8738 9223 + Glyco_tran_28_C
CAZyme k141_109750 k141_109750_9 9224 9961 + GT32
NULL(UNKNOWN) k141_109750 k141_109750_10 9930 11081 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_109750 k141_109750_11 11081 11953 + GT2
CAZyme k141_109750 k141_109750_12 11981 12943 + GT2
Gene ID: k141_109750_3
Type: TC
Location: 4633 - 5331 (+)
Gene ID: k141_109750_4
Type: TC
Location: 5341 - 6036 (+)
Gene ID: k141_109750_5
Type: pfam
Location: 6076 - 6798 (+)
Gene ID: k141_109750_6
Type: TC
Location: 6904 - 8280 (+)
Gene ID: k141_109750_7
Type: pfam
Location: 8289 - 8738 (+)
Gene ID: k141_109750_8
Type: pfam
Location: 8738 - 9223 (+)
Gene ID: k141_109750_9
Type: CAZyme
Location: 9224 - 9961 (+)
Gene ID: k141_109750_10
Type:
Location: 9930 - 11081 (+)
Gene ID: k141_109750_11
Type: CAZyme
Location: 11081 - 11953 (+)
Gene ID: k141_109750_12
Type: CAZyme
Location: 11981 - 12943 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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