Cluster: CGMR023309_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR023309
- CGC Family ID: CGCFAM_00063
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_80781 | k141_80781_2 | 1070 | 3181 | + | 3.A.9.1.2 |
| CAZyme | k141_80781 | k141_80781_3 | 3366 | 4874 | + | GH77 |
| CAZyme | k141_80781 | k141_80781_4 | 4867 | 7131 | + | GT35 |
| TF | k141_80781 | k141_80781_5 | 7381 | 8088 | - | GntR |
| pfam | k141_80781 | k141_80781_6 | 8284 | 9075 | + | Exo_endo_phos |
| TC | k141_80781 | k141_80781_7 | 9108 | 11276 | + | 4.A.1.1.11 |
Gene ID: k141_80781_2
Type: TC
Location: 1070 - 3181 (+)
Type: TC
Location: 1070 - 3181 (+)
Gene ID: k141_80781_3
Type: CAZyme
Location: 3366 - 4874 (+)
Type: CAZyme
Location: 3366 - 4874 (+)
Gene ID: k141_80781_4
Type: CAZyme
Location: 4867 - 7131 (+)
Type: CAZyme
Location: 4867 - 7131 (+)
Gene ID: k141_80781_5
Type: TF
Location: 7381 - 8088 (-)
Type: TF
Location: 7381 - 8088 (-)
Gene ID: k141_80781_6
Type: pfam
Location: 8284 - 9075 (+)
Type: pfam
Location: 8284 - 9075 (+)
Gene ID: k141_80781_7
Type: TC
Location: 9108 - 11276 (+)
Type: TC
Location: 9108 - 11276 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus suis_AA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.