Cluster: CGMR023309_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR023309
- CGC Family ID: CGCFAM_02168
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_79083 | k141_79083_1 | 171 | 932 | + | 3.A.1.3.9 |
| TC | k141_79083 | k141_79083_2 | 942 | 1781 | + | 3.A.1.3.16 |
| TC | k141_79083 | k141_79083_3 | 1795 | 2493 | + | 3.A.1.3.16 |
| TC | k141_79083 | k141_79083_4 | 2508 | 3167 | + | 3.A.1.3.18 |
| pfam | k141_79083 | k141_79083_5 | 3240 | 5252 | - | tRNA-synt_2b | TGS | HGTP_anticodon | tRNA_SAD |
| NULL(UNKNOWN) | k141_79083 | k141_79083_6 | 5980 | 6354 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_79083 | k141_79083_7 | 6369 | 7682 | - | GT4 |
| CAZyme | k141_79083 | k141_79083_8 | 7703 | 8746 | - | GT4 |
Gene ID: k141_79083_1
Type: TC
Location: 171 - 932 (+)
Type: TC
Location: 171 - 932 (+)
Gene ID: k141_79083_2
Type: TC
Location: 942 - 1781 (+)
Type: TC
Location: 942 - 1781 (+)
Gene ID: k141_79083_3
Type: TC
Location: 1795 - 2493 (+)
Type: TC
Location: 1795 - 2493 (+)
Gene ID: k141_79083_4
Type: TC
Location: 2508 - 3167 (+)
Type: TC
Location: 2508 - 3167 (+)
Gene ID: k141_79083_5
Type: pfam
Location: 3240 - 5252 (-)
Type: pfam
Location: 3240 - 5252 (-)
Gene ID: k141_79083_6
Type:
Location: 5980 - 6354 (-)
Type:
Location: 5980 - 6354 (-)
Gene ID: k141_79083_7
Type: CAZyme
Location: 6369 - 7682 (-)
Type: CAZyme
Location: 6369 - 7682 (-)
Gene ID: k141_79083_8
Type: CAZyme
Location: 7703 - 8746 (-)
Type: CAZyme
Location: 7703 - 8746 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus suis_AA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.