Cluster: CGMR023309_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR023309
- CGC Family ID: CGCFAM_00055
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_149893 | k141_149893_1 | 1 | 570 | - | 3.A.1.103.5 |
| pfam | k141_149893 | k141_149893_2 | 570 | 1373 | - | ABC2_membrane |
| CAZyme | k141_149893 | k141_149893_3 | 1383 | 2309 | - | GT2 |
| CAZyme | k141_149893 | k141_149893_4 | 2299 | 3453 | - | GT4 |
Gene ID: k141_149893_1
Type: TC
Location: 1 - 570 (-)
Type: TC
Location: 1 - 570 (-)
Gene ID: k141_149893_2
Type: pfam
Location: 570 - 1373 (-)
Type: pfam
Location: 570 - 1373 (-)
Gene ID: k141_149893_3
Type: CAZyme
Location: 1383 - 2309 (-)
Type: CAZyme
Location: 1383 - 2309 (-)
Gene ID: k141_149893_4
Type: CAZyme
Location: 2299 - 3453 (-)
Type: CAZyme
Location: 2299 - 3453 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus suis_AA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.