Cluster: CGMR023178_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR023178
- CGC Family ID: CGCFAM_08381
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2475 | k141_2475_138 | 143571 | 143900 | + | 2.A.7.1.10 |
| CAZyme | k141_2475 | k141_2475_139 | 144113 | 146593 | - | CBM67 | GH78 |
| CAZyme | k141_2475 | k141_2475_140 | 146629 | 148557 | - | PL35 |
| TF | k141_2475 | k141_2475_141 | 148658 | 149665 | + | LacI |
| pfam | k141_2475 | k141_2475_142 | 149743 | 150243 | - | PgpA |
| TC | k141_2475 | k141_2475_143 | 150248 | 150829 | - | 4.F.1.1.7 |
Gene ID: k141_2475_138
Type: TC
Location: 143571 - 143900 (+)
Type: TC
Location: 143571 - 143900 (+)
Gene ID: k141_2475_139
Type: CAZyme
Location: 144113 - 146593 (-)
Type: CAZyme
Location: 144113 - 146593 (-)
Gene ID: k141_2475_140
Type: CAZyme
Location: 146629 - 148557 (-)
Type: CAZyme
Location: 146629 - 148557 (-)
Gene ID: k141_2475_141
Type: TF
Location: 148658 - 149665 (+)
Type: TF
Location: 148658 - 149665 (+)
Gene ID: k141_2475_142
Type: pfam
Location: 149743 - 150243 (-)
Type: pfam
Location: 149743 - 150243 (-)
Gene ID: k141_2475_143
Type: TC
Location: 150248 - 150829 (-)
Type: TC
Location: 150248 - 150829 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
CAKUIA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.