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Cluster: CGMR023156_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_99341 k141_99341_2 571 4218 + GH73
TC k141_99341 k141_99341_3 4456 5820 + 9.B.18.1.2
pfam k141_99341 k141_99341_4 5966 7135 + UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme k141_99341 k141_99341_5 7144 8331 + GT2
TC k141_99341 k141_99341_6 8560 9687 + 3.A.1.103.4
TC k141_99341 k141_99341_7 9692 10474 + 3.A.1.103.1
CAZyme k141_99341 k141_99341_8 10476 12635 + GT2 | GT2
CAZyme k141_99341 k141_99341_9 12635 14572 + GT2
NULL(UNKNOWN) k141_99341 k141_99341_10 14584 15258 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_99341 k141_99341_11 15251 17074 + DUF2142
CAZyme k141_99341 k141_99341_12 17483 18211 + GT2
Gene ID: k141_99341_2
Type: CAZyme
Location: 571 - 4218 (+)
Gene ID: k141_99341_3
Type: TC
Location: 4456 - 5820 (+)
Gene ID: k141_99341_4
Type: pfam
Location: 5966 - 7135 (+)
Gene ID: k141_99341_5
Type: CAZyme
Location: 7144 - 8331 (+)
Gene ID: k141_99341_6
Type: TC
Location: 8560 - 9687 (+)
Gene ID: k141_99341_7
Type: TC
Location: 9692 - 10474 (+)
Gene ID: k141_99341_8
Type: CAZyme
Location: 10476 - 12635 (+)
Gene ID: k141_99341_9
Type: CAZyme
Location: 12635 - 14572 (+)
Gene ID: k141_99341_10
Type:
Location: 14584 - 15258 (+)
Gene ID: k141_99341_11
Type: pfam
Location: 15251 - 17074 (+)
Gene ID: k141_99341_12
Type: CAZyme
Location: 17483 - 18211 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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