Cluster: CGMR023156_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023156
- CGC Family ID: CGCFAM_05452
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_159427 | k141_159427_2 | 4498 | 10971 | + | CBM32 | GH31_18 |
| NULL(UNKNOWN) | k141_159427 | k141_159427_3 | 11142 | 11402 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_159427 | k141_159427_4 | 11617 | 12501 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_159427 | k141_159427_5 | 12954 | 13775 | + | 2.A.119.2.1 |
| pfam | k141_159427 | k141_159427_6 | 13900 | 14865 | + | Ldh_1_N | Ldh_1_C |
| pfam | k141_159427 | k141_159427_7 | 14897 | 15727 | + | Amidase_3 |
| TC | k141_159427 | k141_159427_8 | 15992 | 17440 | + | 9.B.174.1.1 |
Gene ID: k141_159427_2
Type: CAZyme
Location: 4498 - 10971 (+)
Type: CAZyme
Location: 4498 - 10971 (+)
Gene ID: k141_159427_3
Type:
Location: 11142 - 11402 (-)
Type:
Location: 11142 - 11402 (-)
Gene ID: k141_159427_4
Type:
Location: 11617 - 12501 (-)
Type:
Location: 11617 - 12501 (-)
Gene ID: k141_159427_5
Type: TC
Location: 12954 - 13775 (+)
Type: TC
Location: 12954 - 13775 (+)
Gene ID: k141_159427_6
Type: pfam
Location: 13900 - 14865 (+)
Type: pfam
Location: 13900 - 14865 (+)
Gene ID: k141_159427_7
Type: pfam
Location: 14897 - 15727 (+)
Type: pfam
Location: 14897 - 15727 (+)
Gene ID: k141_159427_8
Type: TC
Location: 15992 - 17440 (+)
Type: TC
Location: 15992 - 17440 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp000508865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.