dbCAN Logo

Cluster: CGMR023156_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_94382 k141_94382_1 1 567 + 9.B.18.2.1
CAZyme k141_94382 k141_94382_2 570 1406 + GT2
CAZyme k141_94382 k141_94382_3 1403 2518 + GT4
CAZyme k141_94382 k141_94382_4 2515 3597 + GT4
pfam k141_94382 k141_94382_5 3602 4882 + Wzy_C
pfam k141_94382 k141_94382_6 4872 5831 + Acyl_transf_3
CAZyme k141_94382 k141_94382_7 6049 7113 + GT4
NULL(UNKNOWN) k141_94382 k141_94382_8 7100 7621 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_94382 k141_94382_9 7618 8823 + GT4
CAZyme k141_94382 k141_94382_10 8839 10020 + GT4
Gene ID: k141_94382_1
Type: TC
Location: 1 - 567 (+)
Gene ID: k141_94382_2
Type: CAZyme
Location: 570 - 1406 (+)
Gene ID: k141_94382_3
Type: CAZyme
Location: 1403 - 2518 (+)
Gene ID: k141_94382_4
Type: CAZyme
Location: 2515 - 3597 (+)
Gene ID: k141_94382_5
Type: pfam
Location: 3602 - 4882 (+)
Gene ID: k141_94382_6
Type: pfam
Location: 4872 - 5831 (+)
Gene ID: k141_94382_7
Type: CAZyme
Location: 6049 - 7113 (+)
Gene ID: k141_94382_8
Type:
Location: 7100 - 7621 (+)
Gene ID: k141_94382_9
Type: CAZyme
Location: 7618 - 8823 (+)
Gene ID: k141_94382_10
Type: CAZyme
Location: 8839 - 10020 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List