Cluster: CGMR023156_CGC31
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023156
- CGC Family ID: CGCFAM_00100
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_40271 | k141_40271_7 | 6874 | 12132 | - | CBM32 | CBM32 |
| pfam | k141_40271 | k141_40271_8 | 13206 | 13604 | - | ATP-synt_DE | ATP-synt_DE_N |
| TC | k141_40271 | k141_40271_9 | 13597 | 15003 | - | 3.A.2.1.5 |
| TC | k141_40271 | k141_40271_10 | 15015 | 15872 | - | 3.A.2.1.5 |
| TC | k141_40271 | k141_40271_11 | 15879 | 17402 | - | 3.A.2.1.5 |
| TC | k141_40271 | k141_40271_12 | 17412 | 17945 | - | 3.A.2.1.5 |
| pfam | k141_40271 | k141_40271_13 | 17945 | 18445 | - | ATP-synt_B |
| TC | k141_40271 | k141_40271_14 | 18463 | 18690 | - | 3.A.2.1.5 |
| TC | k141_40271 | k141_40271_15 | 18753 | 19415 | - | 3.A.2.1.5 |
Gene ID: k141_40271_7
Type: CAZyme
Location: 6874 - 12132 (-)
Type: CAZyme
Location: 6874 - 12132 (-)
Gene ID: k141_40271_8
Type: pfam
Location: 13206 - 13604 (-)
Type: pfam
Location: 13206 - 13604 (-)
Gene ID: k141_40271_9
Type: TC
Location: 13597 - 15003 (-)
Type: TC
Location: 13597 - 15003 (-)
Gene ID: k141_40271_10
Type: TC
Location: 15015 - 15872 (-)
Type: TC
Location: 15015 - 15872 (-)
Gene ID: k141_40271_11
Type: TC
Location: 15879 - 17402 (-)
Type: TC
Location: 15879 - 17402 (-)
Gene ID: k141_40271_12
Type: TC
Location: 17412 - 17945 (-)
Type: TC
Location: 17412 - 17945 (-)
Gene ID: k141_40271_13
Type: pfam
Location: 17945 - 18445 (-)
Type: pfam
Location: 17945 - 18445 (-)
Gene ID: k141_40271_14
Type: TC
Location: 18463 - 18690 (-)
Type: TC
Location: 18463 - 18690 (-)
Gene ID: k141_40271_15
Type: TC
Location: 18753 - 19415 (-)
Type: TC
Location: 18753 - 19415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp000508865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_40271_10 | vegan > omnivore | 4.37036 | 0.00186 |
| k141_40271_10 | vegetarian > omnivore | 3.53153 | 0.02751 |