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Cluster: CGMR023156_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_194052 k141_194052_2 466 1077 + 9.B.18.1.3
pfam k141_194052 k141_194052_3 1077 1916 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme k141_194052 k141_194052_4 1913 3046 + GT4
CAZyme k141_194052 k141_194052_5 3047 4126 + GT2
pfam k141_194052 k141_194052_6 4126 5364 + Glycos_transf_1 | Glyco_trans_1_4
NULL(UNKNOWN) k141_194052 k141_194052_7 5354 6607 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_194052 k141_194052_8 6645 7904 + GT4
pfam k141_194052 k141_194052_9 7897 8436 + Hexapep | Hexapep_2
pfam k141_194052 k141_194052_10 8465 9457 + Glycos_transf_2 | GNT-I
CAZyme k141_194052 k141_194052_11 9447 10430 + GT2
CAZyme k141_194052 k141_194052_12 10628 11647 + GT2
pfam k141_194052 k141_194052_13 11657 12544 + ATPgrasp_TupA
TC k141_194052 k141_194052_14 12577 14127 + 2.A.66.1.40
pfam k141_194052 k141_194052_15 14284 15552 - DEDD_Tnp_IS110 | Transposase_20
CAZyme k141_194052 k141_194052_16 15859 16920 + GT10
Gene ID: k141_194052_2
Type: TC
Location: 466 - 1077 (+)
Gene ID: k141_194052_3
Type: pfam
Location: 1077 - 1916 (+)
Gene ID: k141_194052_4
Type: CAZyme
Location: 1913 - 3046 (+)
Gene ID: k141_194052_5
Type: CAZyme
Location: 3047 - 4126 (+)
Gene ID: k141_194052_6
Type: pfam
Location: 4126 - 5364 (+)
Gene ID: k141_194052_7
Type:
Location: 5354 - 6607 (+)
Gene ID: k141_194052_8
Type: CAZyme
Location: 6645 - 7904 (+)
Gene ID: k141_194052_9
Type: pfam
Location: 7897 - 8436 (+)
Gene ID: k141_194052_10
Type: pfam
Location: 8465 - 9457 (+)
Gene ID: k141_194052_11
Type: CAZyme
Location: 9447 - 10430 (+)
Gene ID: k141_194052_12
Type: CAZyme
Location: 10628 - 11647 (+)
Gene ID: k141_194052_13
Type: pfam
Location: 11657 - 12544 (+)
Gene ID: k141_194052_14
Type: TC
Location: 12577 - 14127 (+)
Gene ID: k141_194052_15
Type: pfam
Location: 14284 - 15552 (-)
Gene ID: k141_194052_16
Type: CAZyme
Location: 15859 - 16920 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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