Cluster: CGMR023156_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR023156
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_67736 | k141_67736_7 | 5158 | 7065 | + | 4.A.1.2.9 |
| CAZyme | k141_67736 | k141_67736_8 | 7085 | 8533 | + | GH32 |
| CAZyme | k141_67736 | k141_67736_9 | 8523 | 9899 | + | GH32 |
| pfam | k141_67736 | k141_67736_10 | 9896 | 10777 | + | ROK |
| pfam | k141_67736 | k141_67736_11 | 11164 | 11583 | + | 2-thiour_desulf |
| TC | k141_67736 | k141_67736_12 | 11758 | 14838 | + | 3.A.1.122.2 |
Gene ID: k141_67736_7
Type: TC
Location: 5158 - 7065 (+)
Type: TC
Location: 5158 - 7065 (+)
Gene ID: k141_67736_8
Type: CAZyme
Location: 7085 - 8533 (+)
Type: CAZyme
Location: 7085 - 8533 (+)
Gene ID: k141_67736_9
Type: CAZyme
Location: 8523 - 9899 (+)
Type: CAZyme
Location: 8523 - 9899 (+)
Gene ID: k141_67736_10
Type: pfam
Location: 9896 - 10777 (+)
Type: pfam
Location: 9896 - 10777 (+)
Gene ID: k141_67736_11
Type: pfam
Location: 11164 - 11583 (+)
Type: pfam
Location: 11164 - 11583 (+)
Gene ID: k141_67736_12
Type: TC
Location: 11758 - 14838 (+)
Type: TC
Location: 11758 - 14838 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp000508865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_67736_10 | vegan > omnivore | 1.50796 | 0.00186 |