Cluster: CGMR023156_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR023156
- CGC Family ID: CGCFAM_00040
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_12294 | k141_12294_6 | 4964 | 6070 | + | GT4 |
| CAZyme | k141_12294 | k141_12294_7 | 6181 | 7104 | + | GT2 |
| CAZyme | k141_12294 | k141_12294_8 | 7132 | 8181 | + | GT2 |
| NULL(UNKNOWN) | k141_12294 | k141_12294_9 | 8201 | 9454 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_12294 | k141_12294_10 | 9485 | 10387 | + | GT2 |
| TC | k141_12294 | k141_12294_11 | 10401 | 11834 | + | 2.A.66.2.16 |
Gene ID: k141_12294_6
Type: CAZyme
Location: 4964 - 6070 (+)
Type: CAZyme
Location: 4964 - 6070 (+)
Gene ID: k141_12294_7
Type: CAZyme
Location: 6181 - 7104 (+)
Type: CAZyme
Location: 6181 - 7104 (+)
Gene ID: k141_12294_8
Type: CAZyme
Location: 7132 - 8181 (+)
Type: CAZyme
Location: 7132 - 8181 (+)
Gene ID: k141_12294_9
Type:
Location: 8201 - 9454 (+)
Type:
Location: 8201 - 9454 (+)
Gene ID: k141_12294_10
Type: CAZyme
Location: 9485 - 10387 (+)
Type: CAZyme
Location: 9485 - 10387 (+)
Gene ID: k141_12294_11
Type: TC
Location: 10401 - 11834 (+)
Type: TC
Location: 10401 - 11834 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp000508865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.