Cluster: CGMR023156_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR023156
- CGC Family ID: CGCFAM_00253
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_156936 | k141_156936_5 | 2525 | 3133 | + | 9.B.18.1.2 |
| pfam | k141_156936 | k141_156936_6 | 3133 | 3783 | + | Formyl_trans_N |
| CAZyme | k141_156936 | k141_156936_7 | 3767 | 4933 | + | GT4 |
| CAZyme | k141_156936 | k141_156936_8 | 5051 | 6106 | + | GT2 |
| pfam | k141_156936 | k141_156936_9 | 6115 | 7200 | + | PS_pyruv_trans |
| pfam | k141_156936 | k141_156936_10 | 7193 | 8143 | + | FrhB_FdhB_C |
| CAZyme | k141_156936 | k141_156936_11 | 8165 | 9115 | + | GT2 |
| CAZyme | k141_156936 | k141_156936_12 | 9199 | 10134 | + | GT2 |
Gene ID: k141_156936_5
Type: TC
Location: 2525 - 3133 (+)
Type: TC
Location: 2525 - 3133 (+)
Gene ID: k141_156936_6
Type: pfam
Location: 3133 - 3783 (+)
Type: pfam
Location: 3133 - 3783 (+)
Gene ID: k141_156936_7
Type: CAZyme
Location: 3767 - 4933 (+)
Type: CAZyme
Location: 3767 - 4933 (+)
Gene ID: k141_156936_8
Type: CAZyme
Location: 5051 - 6106 (+)
Type: CAZyme
Location: 5051 - 6106 (+)
Gene ID: k141_156936_9
Type: pfam
Location: 6115 - 7200 (+)
Type: pfam
Location: 6115 - 7200 (+)
Gene ID: k141_156936_10
Type: pfam
Location: 7193 - 8143 (+)
Type: pfam
Location: 7193 - 8143 (+)
Gene ID: k141_156936_11
Type: CAZyme
Location: 8165 - 9115 (+)
Type: CAZyme
Location: 8165 - 9115 (+)
Gene ID: k141_156936_12
Type: CAZyme
Location: 9199 - 10134 (+)
Type: CAZyme
Location: 9199 - 10134 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp000508865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.