Cluster: CGMR023156_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023156
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_120514 | k141_120514_5 | 3014 | 3781 | + | 3.A.1.134.12 |
| TC | k141_120514 | k141_120514_6 | 3768 | 5762 | + | 3.A.1.134.7 |
| pfam | k141_120514 | k141_120514_7 | 5882 | 6496 | + | Pentapeptide | Pentapeptide_4 |
| sulfatase | k141_120514 | k141_120514_8 | 6591 | 8408 | + | S1_97 |
| CAZyme | k141_120514 | k141_120514_9 | 8871 | 12134 | + | GH3 |
Gene ID: k141_120514_5
Type: TC
Location: 3014 - 3781 (+)
Type: TC
Location: 3014 - 3781 (+)
Gene ID: k141_120514_6
Type: TC
Location: 3768 - 5762 (+)
Type: TC
Location: 3768 - 5762 (+)
Gene ID: k141_120514_7
Type: pfam
Location: 5882 - 6496 (+)
Type: pfam
Location: 5882 - 6496 (+)
Gene ID: k141_120514_8
Type: sulfatase
Location: 6591 - 8408 (+)
Type: sulfatase
Location: 6591 - 8408 (+)
Gene ID: k141_120514_9
Type: CAZyme
Location: 8871 - 12134 (+)
Type: CAZyme
Location: 8871 - 12134 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp000508865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_120514_8 | vegetarian > omnivore | 1.92652 | 0.02445 |
| k141_120514_8 | vegetarian > vegan | 2.05144 | 0.03027 |