Cluster: CGMR023156_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR023156
- CGC Family ID: CGCFAM_00326
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_100338 | k141_100338_2 | 1252 | 6879 | - | CBM32 | CBM32 | GH20 |
| CAZyme | k141_100338 | k141_100338_3 | 7226 | 13192 | - | CBM32 |
| NULL(UNKNOWN) | k141_100338 | k141_100338_4 | 13656 | 14021 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_100338 | k141_100338_5 | 14042 | 14467 | + | NfeD |
| TC | k141_100338 | k141_100338_6 | 14481 | 15392 | + | 8.A.21.2.2 |
Gene ID: k141_100338_2
Type: CAZyme
Location: 1252 - 6879 (-)
Type: CAZyme
Location: 1252 - 6879 (-)
Gene ID: k141_100338_3
Type: CAZyme
Location: 7226 - 13192 (-)
Type: CAZyme
Location: 7226 - 13192 (-)
Gene ID: k141_100338_4
Type:
Location: 13656 - 14021 (+)
Type:
Location: 13656 - 14021 (+)
Gene ID: k141_100338_5
Type: pfam
Location: 14042 - 14467 (+)
Type: pfam
Location: 14042 - 14467 (+)
Gene ID: k141_100338_6
Type: TC
Location: 14481 - 15392 (+)
Type: TC
Location: 14481 - 15392 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp000508865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_100338_6 | vegetarian > omnivore | 1.01397 | 0.02751 |
| k141_100338_6 | vegetarian > vegan | 1.87218 | 0.03027 |