Cluster: CGMR023156_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR023156
- CGC Family ID: CGCFAM_00384
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_16680 | k141_16680_45 | 47935 | 48918 | + | 3.A.5.1.1 |
| STP | k141_16680 | k141_16680_46 | 48921 | 49250 | + | Sigma70_r4 |
| TC | k141_16680 | k141_16680_47 | 49263 | 50657 | + | 3.A.5.1.1 |
| CAZyme | k141_16680 | k141_16680_48 | 50807 | 54136 | + | GH3 |
Gene ID: k141_16680_45
Type: TC
Location: 47935 - 48918 (+)
Type: TC
Location: 47935 - 48918 (+)
Gene ID: k141_16680_46
Type: STP
Location: 48921 - 49250 (+)
Type: STP
Location: 48921 - 49250 (+)
Gene ID: k141_16680_47
Type: TC
Location: 49263 - 50657 (+)
Type: TC
Location: 49263 - 50657 (+)
Gene ID: k141_16680_48
Type: CAZyme
Location: 50807 - 54136 (+)
Type: CAZyme
Location: 50807 - 54136 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia sp000508865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_16680_45 | vegan > omnivore | 1.53043 | 0.00186 |