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Cluster: CGMR022678_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_14541 k141_14541_31 36506 39496 + 9.B.74.1.3
TF k141_14541 k141_14541_32 39622 40647 - LacI
CAZyme k141_14541 k141_14541_33 40806 42242 + GH32
STP k141_14541 k141_14541_34 42257 43537 + SBP_bac_1
TC k141_14541 k141_14541_35 43551 44501 + 3.A.1.1.4
TC k141_14541 k141_14541_36 44501 45328 + 3.A.1.1.7
CAZyme k141_14541 k141_14541_37 45332 46780 + GH32
pfam k141_14541 k141_14541_38 46788 47657 + ROK
TC k141_14541 k141_14541_39 47682 47855 + 3.A.1.1.20
TC k141_14541 k141_14541_40 47886 48791 + 3.A.1.1.20
TC k141_14541 k141_14541_41 48943 49410 + 4.A.1.1.9
TC k141_14541 k141_14541_42 49583 51136 + 4.A.1.1.8
CAZyme k141_14541 k141_14541_43 51172 52509 + GH4
Gene ID: k141_14541_31
Type: TC
Location: 36506 - 39496 (+)
Gene ID: k141_14541_32
Type: TF
Location: 39622 - 40647 (-)
Gene ID: k141_14541_33
Type: CAZyme
Location: 40806 - 42242 (+)
Gene ID: k141_14541_34
Type: STP
Location: 42257 - 43537 (+)
Gene ID: k141_14541_35
Type: TC
Location: 43551 - 44501 (+)
Gene ID: k141_14541_36
Type: TC
Location: 44501 - 45328 (+)
Gene ID: k141_14541_37
Type: CAZyme
Location: 45332 - 46780 (+)
Gene ID: k141_14541_38
Type: pfam
Location: 46788 - 47657 (+)
Gene ID: k141_14541_39
Type: TC
Location: 47682 - 47855 (+)
Gene ID: k141_14541_40
Type: TC
Location: 47886 - 48791 (+)
Gene ID: k141_14541_41
Type: TC
Location: 48943 - 49410 (+)
Gene ID: k141_14541_42
Type: TC
Location: 49583 - 51136 (+)
Gene ID: k141_14541_43
Type: CAZyme
Location: 51172 - 52509 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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